NPdia

BGC0001329Hybrid

Rakicidin D

Producing organism: Streptomyces lilacinus
Taxonomy: Bacteria›Actinomycetota›Actinomycetes›Kitasatosporales›Streptomycetaceae›Streptomyces
Biosynthetic class: NRPS (Type I);PKS (Unknown)
Total steps: 9
DOI: 10.1186/s40793-016-0205-3
MIBiG entry: View on MIBiG ↗

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rakicidin D

C₂₄H₃₈N₄O₇494.27 Da

Biosynthetic (core)

Biosynthetic (additional)

Transport

Unknown

Domains

Ketosynthase (KS)

Acyltransferase (AT)

Dehydratase (DH)

Enoylreductase (ER)

Ketoreductase (KR)

Acyl carrier protein (ACP)

Acyl carrier (ACP)

Condensation (C)

Adenylation (A)

Peptidyl carrier (PCP)

Thioesterase (TE)

TauD oxygenase

9 steps · 8 edges

Starting stepIntermediateFinal product│ModuleLoadingTENo module│PKS stepNRPS stepTailoring/otherScroll to pan · Wheel to zoom

Step	Product ID	Enzyme	Module	Substrate	Product SMILES	Notes
1	`1329-1`	?	—	Hexanoic acid	`O=C(CCCCC[H])O`	—
2	`1329-2`	?;ctg1_orf1;ctg1_orf2	—	1329-1;Methylmalonyl-CoA from: 1329-1	`CC(C(O)=O)CCCCCC[H]`	—
3	`1329-3`	ctg1_orf3	—	1329-2;Methylmalonyl-CoA from: 1329-2	`CC(C(O)C(C(O)=O)C)CCCCCC[H]`	—
4	`1329-4`	ctg1_orf4	—	1329-3;Serine from: 1329-3	`CC(C(O)C(C(NC(C(O)=O)CO)=O)C)CCCCCC[H]`	—
5	`1329-5`	ctg1_orf5	—	1329-4;Malonyl-CoA from: 1329-4	`CC(C(O)C(C(NC(/C=C/C(O)=O)=C)=O)C)CCCCCC[H]`	—
6	`1329-6`	?	—	1329-5;Glycine from: 1329-5	`CC(C(O)C(C(NC(/C=C/C(N(CC(O)=O)C)=O)=C)=O)C)CCCCCC[H]`	—
7	`1329-7`	?	—	1329-6;Asparagine from: 1329-6	`CC(C(O)C(C(NC(/C=C/C(N(CC(NC(C(O)=O)CC(N)=O)=O)C)=O)=C)=O)C)CCCCCC[H]`	—
8	`1329-8`	?	—	1329-7 from: 1329-7	`C=C(/C=C/C(N(CC(NC1CC(N)=O)=O)C)=O)NC(C(C)C(C(CCCCCC[H])C)OC1=O)=O`	—
9	`1329`	?	—	1329-8 from: 1329-8	`C=C(/C=C/C(N(CC(NC1C(O)C(N)=O)=O)C)=O)NC(C(C)C(C(CCCCCC[H])C)OC1=O)=O`	—

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